[BLASTTALK] problem with -m 8 parameters

From: Thomas Otto (otto@fiocruz.br)
Date: Tue May 17 2005 - 12:32:28 EDT


Hi folks,

I have a little problem that I so far just found in relation with
mpi-blast and not with the ncbi (blastall 2.2.10) package.

When we are doing a big blast we just want the tableoutput -m 8:
blastall -p blastp -m 8 -d ...
After some tousands lines following error is printed:
[blastall] ERROR: gi|47459466|ref|YP_016328.1|: ObjMgrNextAvailEntityID
failed with idx 2048
[blastall] ERROR: gi|47459466|ref|YP_016328.1|: BioseqFindFunc: couldn't
uncache

The databases are okay, no duplicatons, the formatdb.log gave no error...

Running the blast without m 8 or 9 works, but produce a lot of result,
that we do not need!

Who can help us,

Thanks,
Thomas Otto



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