Re: [BLAST_ANAWARE] convergence of Newton fitter, and chi^2

From: vitaliy ziskin (vziskin@mit.edu)
Date: Tue Jun 03 2003 - 22:20:37 EDT


Chris,
This is all great, but we all use lrn.C to analyzed data. And by
definition if lrn.C does not work with newer verstions of BlastLib (i.e
greater than 2.18) it is useless to most of us. And my experience is
that lrn.C does not work with new versions. Can you please make sure
that lrn.C works with the version that you are working on. Of course
the best would be if most of what lrn.C has to offer is part of the
standart v3 release.

                                                                        
  Cheers, Vitaliy

Chris Crawford wrote:

> hi tong,
> i'm almost done v3. there is something checked in there, but it
> still uses v2 geometry principally. you might have to use the -A flag.
> i'm also tagging v2_20 soon, which will have wang's fast fitter.
> --chris
>
> Frederick Tong-Uk Lee wrote:
>
>> Chris,
>>
>> This sounds good.
>> Hope we get the resolution what we need.
>>
>> Hey, by the way, are you doing something with v3?
>> We are trying to cvs out Aaron's v3 MC and
>> getting empty directories. Do I need to use v2_19
>> for v3 or something?
>>
>> Thanks,
>> -T
>>
>



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